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R High Performance Programming

You're reading from   R High Performance Programming Overcome performance difficulties in R with a range of exciting techniques and solutions

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Product type Paperback
Published in Jan 2015
Publisher
ISBN-13 9781783989263
Length 176 pages
Edition 1st Edition
Languages
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Authors (2):
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Tjhi W Chandra Tjhi W Chandra
Author Profile Icon Tjhi W Chandra
Tjhi W Chandra
Aloysius Shao Qin Lim Aloysius Shao Qin Lim
Author Profile Icon Aloysius Shao Qin Lim
Aloysius Shao Qin Lim
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Toc

Table of Contents (12) Chapters Close

Preface 1. Understanding R's Performance – Why Are R Programs Sometimes Slow? FREE CHAPTER 2. Profiling – Measuring Code's Performance 3. Simple Tweaks to Make R Run Faster 4. Using Compiled Code for Greater Speed 5. Using GPUs to Run R Even Faster 6. Simple Tweaks to Use Less RAM 7. Processing Large Datasets with Limited RAM 8. Multiplying Performance with Parallel Computing 9. Offloading Data Processing to Database Systems 10. R and Big Data Index

Use of simpler data structures

Many R users would agree that data.frame as a data structure is the workhorse of data analysis in R. It provides an intuitive way to represent a typical structured dataset with rows and columns representing observations and variables respectively. A data.frame object also allows more flexibility than a matrix by allowing variables of different types (such as character and numeric variables in a single data.frame). Furthermore, in cases where a data.frame stores only variables of the same type, basic matrix operations conveniently become applicable to it without any explicit coercing required. This convenience, however, can come with performance degradation.

Applying a matrix operation on a data.frame is slower than on a matrix. One of the reasons is that most matrix operations first coerce the data.frame into a matrix before performing the computation. For this reason, where possible, one should use a matrix in place of a data.frame. The next code demonstrates...

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