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Bayesian Analysis with Python

You're reading from   Bayesian Analysis with Python A practical guide to probabilistic modeling

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Product type Paperback
Published in Jan 2024
Publisher Packt
ISBN-13 9781805127161
Length 394 pages
Edition 3rd Edition
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Author (1):
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Osvaldo Martin Osvaldo Martin
Author Profile Icon Osvaldo Martin
Osvaldo Martin
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Table of Contents (15) Chapters Close

Preface
1. Chapter 1 Thinking Probabilistically FREE CHAPTER 2. Chapter 2 Programming Probabilistically 3. Chapter 3 Hierarchical Models 4. Chapter 4 Modeling with Lines 5. Chapter 5 Comparing Models 6. Chapter 6 Modeling with Bambi 7. Chapter 7 Mixture Models 8. Chapter 8 Gaussian Processes 9. Chapter 9 Bayesian Additive Regression Trees 10. Chapter 10 Inference Engines 11. Chapter 11 Where to Go Next 12. Bibliography
13. Other Books You May Enjoy
14. Index

10.5 Sequential Monte Carlo

One of the caveats of Metropolis-Hastings and NUTS (and other Hamiltonian Monte Carlo variants) is that if the posterior has multiple peaks and these peaks are separated by regions of very low probability, these methods can get stuck in a single mode and miss the others!

Many of the methods developed to overcome this multiple minima problem are based on the idea of tempering. This idea, once again, is borrowed from statistical mechanics. The number of states a physical system can populate depends on the temperature of the system; at 0 Kelvin (the lowest possible temperature), every system is stuck in a single state. On the other extreme, for an infinite temperature, all possible states are equally likely. Generally, we are interested in systems at some intermediate temperature. For Bayesian models, there is a very intuitive way to adapt this tempering idea by writing Bayes’ theorem with a twist.

 β p(θ | y)β = p(y | θ) p(θ)

The parameter β is known as the inverse temperature...

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