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Deep Learning for Genomics

You're reading from   Deep Learning for Genomics Data-driven approaches for genomics applications in life sciences and biotechnology

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Product type Paperback
Published in Nov 2022
Publisher Packt
ISBN-13 9781804615447
Length 270 pages
Edition 1st Edition
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Author (1):
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Upendra Kumar Devisetty Upendra Kumar Devisetty
Author Profile Icon Upendra Kumar Devisetty
Upendra Kumar Devisetty
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Table of Contents (18) Chapters Close

Preface 1. Part 1 – Machine Learning in Genomics
2. Chapter 1: Introducing Machine Learning for Genomics FREE CHAPTER 3. Chapter 2: Genomics Data Analysis 4. Chapter 3: Machine Learning Methods for Genomic Applications 5. Part 2 – Deep Learning for Genomic Applications
6. Chapter 4: Deep Learning for Genomics 7. Chapter 5: Introducing Convolutional Neural Networks for Genomics 8. Chapter 6: Recurrent Neural Networks in Genomics 9. Chapter 7: Unsupervised Deep Learning with Autoencoders 10. Chapter 8: GANs for Improving Models in Genomics 11. Part 3 – Operationalizing models
12. Chapter 9: Building and Tuning Deep Learning Models 13. Chapter 10: Model Interpretability in Genomics 14. Chapter 11: Model Deployment and Monitoring 15. Chapter 12: Challenges, Pitfalls, and Best Practices for Deep Learning in Genomics 16. Index 17. Other Books You May Enjoy

GANs for Improving Models in Genomics

One of the significant developments in the field of Deep learning (DL) has been the introduction of new generative models. The most popular generative models are Generative Adversarial Networks (GANs), Variational Autoencoders (VAE), deep autoregressive models, style transfer, and so on. We learned about what VAEs are in the previous chapter. GANs have become a hot topic in the DL research community in the last few years. They were introduced by Ian Goodfellow in 2014 and are considered one of the most interesting ideas of the last 10 years by Yann LeCun, who is considered the father of modern DL. A GAN, as the name suggests, is a type of generative model that is trained in an adversarial setting to learn data distribution that is closer to the real world, thereby generating synthetic data inexpensively. GANs have revolutionized many domains such as natural language processing (NLP), computer vision (CV), and, most recently, genomics because of...

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