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Deep Learning for Genomics

You're reading from   Deep Learning for Genomics Data-driven approaches for genomics applications in life sciences and biotechnology

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Product type Paperback
Published in Nov 2022
Publisher Packt
ISBN-13 9781804615447
Length 270 pages
Edition 1st Edition
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Author (1):
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Upendra Kumar Devisetty Upendra Kumar Devisetty
Author Profile Icon Upendra Kumar Devisetty
Upendra Kumar Devisetty
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Table of Contents (18) Chapters Close

Preface 1. Part 1 – Machine Learning in Genomics
2. Chapter 1: Introducing Machine Learning for Genomics FREE CHAPTER 3. Chapter 2: Genomics Data Analysis 4. Chapter 3: Machine Learning Methods for Genomic Applications 5. Part 2 – Deep Learning for Genomic Applications
6. Chapter 4: Deep Learning for Genomics 7. Chapter 5: Introducing Convolutional Neural Networks for Genomics 8. Chapter 6: Recurrent Neural Networks in Genomics 9. Chapter 7: Unsupervised Deep Learning with Autoencoders 10. Chapter 8: GANs for Improving Models in Genomics 11. Part 3 – Operationalizing models
12. Chapter 9: Building and Tuning Deep Learning Models 13. Chapter 10: Model Interpretability in Genomics 14. Chapter 11: Model Deployment and Monitoring 15. Chapter 12: Challenges, Pitfalls, and Best Practices for Deep Learning in Genomics 16. Index 17. Other Books You May Enjoy

Building and Tuning Deep Learning Models

Deep learning (DL) algorithmic solutions are currently being leveraged in several biological and life sciences domains to address some of the most challenging problems in healthcare, medicine, agriculture, genomics, and so on. Among these disciplines, genomics poses extreme challenges to DL because of how complex the field of genomics is, which goes way beyond the knowledge of how to interpret genomes. Thankfully, a lot of genomics research with DL has led to the design of sophisticated deep neural networks (DNN) architectures that are suited to genomic tasks. This intersection of DL with genomics proved very successful, leading to the application of DL to several genomic applications in regulatory genomics, functional genomics, structural genomics, and so on. Furthermore, it allowed the genomics research community to gain a global perspective of the human genome, which is paving the way for the goal of genomic medicine in near future.

So...

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