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Biostatistics with Python

You're reading from   Biostatistics with Python Apply Python for biostatistics with hands-on biomedical and biotechnology projects

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Product type Paperback
Published in Nov 2024
Publisher Packt
ISBN-13 9781837630967
Length 374 pages
Edition 1st Edition
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Author (1):
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Darko Medin Darko Medin
Author Profile Icon Darko Medin
Darko Medin
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Table of Contents (24) Chapters Close

Preface 1. Part 1:Introduction to Biostatistics and Getting Started with Python
2. Chapter 1: Introduction to Biostatistics FREE CHAPTER 3. Chapter 2: Getting Started with Python for Biostatistics 4. Chapter 3: Exercise 1 – Cleaning and Describing Data Using Python 5. Chapter 4: Part 1 Exemplar Project – Load, Clean, and Describe Diabetes Data in Python 6. Part 2:Introduction to Python for Biostatistics – Methodology and Examples
7. Chapter 5: Introduction to Python for Biostatistics 8. Chapter 6: Biostatistical Inference Using Hypothesis Tests and Effect Sizes 9. Chapter 7: Predictive Biostatistics Using Python 10. Chapter 8: Part 2 Exercise – T-Test, ANOVA, and Linear and Logistic Regression 11. Chapter 9: Biostatistical Inference and Predictive Analytics Using Cardiovascular Study Data 12. Part 3:Clinical Study Design, Analysis, and Synthesizing Evidence
13. Chapter 10: Clinical Study Design 14. Chapter 11: Survival Analysis in Biomedical Research 15. Chapter 12: Meta-Analysis – Synthesizing Evidence from Multiple Studies 16. Chapter 13: Survival Predictive Analysis and Meta-Analysis Practice 17. Chapter 14: Part 3 Exemplar Project – Meta-Analysis of Survival Data in Clinical Research 18. Part 4:Biological and Statistical Variables and Frameworks, and a Final Practical Project from the Field of Biology
19. Chapter 15: Understanding Biological Variables 20. Chapter 16: Data Analysis Frameworks and Performance for Life Sciences Research 21. Chapter 17: Part 4 Exercise – Performing Statistics for Biology Studies in Python 22. Index 23. Other Books You May Enjoy

The Cleveland dataset

The Cleveland Heart Disease dataset (http://archive.ics.uci.edu/dataset/45/heart+disease) is a dataset used in exemplar data analysis and machine learning for predicting the presence or absence of heart disease in patients. In this case, we will use it for biostatistical example purposes.

To proceed with this chapter, please download the dataset using the link provided (the downloaded file should be in .data format). Here is the name of the dataset found in the .zip file you downloaded: processed.cleveland.data

Here is the citation for the dataset: Janosi, Andras, Steinbrunn, William, Pfisterer, Matthias, and Detrano, Robert. (1988). Heart Disease. UCI Machine Learning Repository. https://doi.org/10.24432/C52P4X. Before proceeding with analyzing the variables, let’s first explore the main topic in this project, which is coronary artery disease (CAD). This specific form of heart disease is characterized by 50% or more congestion of the heart’...

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