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Hands-On Big Data Analytics with PySpark

You're reading from   Hands-On Big Data Analytics with PySpark Analyze large datasets and discover techniques for testing, immunizing, and parallelizing Spark jobs

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Product type Paperback
Published in Mar 2019
Publisher Packt
ISBN-13 9781838644130
Length 182 pages
Edition 1st Edition
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Concepts
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Authors (3):
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James Cross James Cross
Author Profile Icon James Cross
James Cross
Bartłomiej Potaczek Bartłomiej Potaczek
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Bartłomiej Potaczek
Rudy Lai Rudy Lai
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Rudy Lai
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Table of Contents (15) Chapters Close

Preface 1. Installing Pyspark and Setting up Your Development Environment 2. Getting Your Big Data into the Spark Environment Using RDDs FREE CHAPTER 3. Big Data Cleaning and Wrangling with Spark Notebooks 4. Aggregating and Summarizing Data into Useful Reports 5. Powerful Exploratory Data Analysis with MLlib 6. Putting Structure on Your Big Data with SparkSQL 7. Transformations and Actions 8. Immutable Design 9. Avoiding Shuffle and Reducing Operational Expenses 10. Saving Data in the Correct Format 11. Working with the Spark Key/Value API 12. Testing Apache Spark Jobs 13. Leveraging the Spark GraphX API 14. Other Books You May Enjoy

An overview of PySpark

Before we start with installing PySpark, which is the Python interface for Spark, let's go through some core concepts in Spark and PySpark. Spark is the latest big data tool from Apache, which can be found by simply going to http://spark.apache.org/. It's a unified analytics engine for large-scale data processing. This means that, if you have a lot of data, you can feed that data into Spark to create some analytics at a good speed. If we look at the running times between Hadoop and Spark, Spark is more than a hundred times faster than Hadoop. It is very easy to use because there are very good APIs for use with Spark.

The four major components of the Spark platform are as follows:

  • Spark SQL: A clearing language for Spark
  • Spark Streaming: Allows you to feed in real-time streaming data
  • MLlib (machine learning): The machine learning library for Spark
  • GraphX (graph): The graphing library for Spark

The core concept in Spark is an RDD, which is similar to the pandas DataFrame, or a Python dictionary or list. It is a way for Spark to store large amounts of data on the infrastructure for us. The key difference of an RDD versus something that is in your local memory, such as a pandas DataFrame, is that an RDD is distributed across many machines, but it appears like one unified dataset. What this means is, if you have large amounts of data that you want to operate on in parallel, you can put it in an RDD and Spark will handle parallelization and the clustering of the data for you.

Spark has three different interfaces, as follows:

  • Scala
  • Java
  • Python

Python is similar to PySpark integration, which we will cover soon. For now, we will import some libraries from the PySpark package to help us work with Spark. The best way for us to understand Spark is to look at an example, as shown in the following screenshot:

lines = sc.textFile("data.txt")
lineLengths = lines.map(lambda s: len(s))
totalLength = lineLengths.reduce(lambda a, b: a + b)

In the preceding code, we have created a new variable called lines by calling SC.textFile ("data.txt"). sc is our Python objects that represent our Spark cluster. A Spark cluster is a series of instances or cloud computers that store our Spark processes. By calling a textFile constructor and feeding in data.text, we have potentially fed in a large text file and created an RDD just using this one line. In other words, what we are trying to do here is to feed a large text file into a distributed cluster and Spark, and Spark handles this clustering for us.

In line two and line three, we have a MapReduce function. In line two, we have mapped the length function using a lambda function to each line of data.text. In line three, we have called a reduction function to add all lineLengths together to produce the total length of the documents. While Python's lines is a variable that contains all the lines in data.text, under the hood, Spark is actually handling the distribution of fragments of data.text in two different instances on the Spark cluster, and is handling the MapReduce computation over all of these instances.

Spark SQL

Spark SQL is one of the four components on top of the Spark platform, as we saw earlier in the chapter. It can be used to execute SQL queries or read data from any existing Hive insulation, where Hive is a database implementation also from Apache. Spark SQL looks very similar to MySQL or Postgres. The following code snippet is a good example:

#Register the DataFrame as a SQL temporary view
df.CreateOrReplaceTempView("people")

sqlDF = spark.sql("SELECT * FROM people")
sqlDF.show()

#+----+-------+
#| age| name|
#+----+-------+
#+null|Jackson|
#| 30| Martin|
#| 19| Melvin|
#+----|-------|

You'll need to select all the columns from a certain table, such as people, and using the Spark objects, you'll feed in a very standard-looking SQL statement, which is going to show an SQL result much like what you would expect from a normal SQL implementation.

Let's now look at datasets and DataFrames. A dataset is a distributed collection of data. It is an interface added in Spark 1.6 that provides benefits on top of RDDs. A DataFrame, on the other hand, is very familiar to those who have used pandas or R. A DataFrame is simply a dataset organized into named columns, which is similar to a relational database or a DataFrame in Python. The main difference between a dataset and a DataFrame is that DataFrames have column names. As you can imagine, this would be very convenient for machine learning work and feeding into things such as scikit-learn.

Let's look at how DataFrames can be used. The following code snippet is a quick example of a DataFrame:

# spark is an existing SparkSession
df = spark.read.json("examples/src/main/resources/people.json")
# Displays the content of the DataFrame to stdout
df.show()

#+----+-------+
#| age| name|
#+----+-------+
#+null|Jackson|
#| 30| Martin|
#| 19| Melvin|
#+----|-------|

In the same way, as pandas or R would do, read.json allows us to feed in some data from a JSON file, and df.show shows us the contents of the DataFrame in a similar way to pandas.

MLlib, as we know, is used to make machine learning scalable and easy. MLlib allows you to do common machine learning tasks, such as featurization; creating pipelines; saving and loading algorithms, models, and pipelines; and also some utilities, such as linear algebra, statistics, and data handling. The other thing to note is that Spark and RDD are almost inseparable concepts. If your main use case for Spark is machine learning, Spark now actually encourages you to use the DataFrame-based API for MLlib, which is quite beneficial to us as we are already familiar with pandas, which means a smooth transition into Spark.

In the next section, we will see how we can set up Spark on Windows, and set up PySpark as the interface.

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