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Hands-On Graph Neural Networks Using Python

You're reading from   Hands-On Graph Neural Networks Using Python Practical techniques and architectures for building powerful graph and deep learning apps with PyTorch

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Product type Paperback
Published in Apr 2023
Publisher Packt
ISBN-13 9781804617526
Length 354 pages
Edition 1st Edition
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Author (1):
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Maxime Labonne Maxime Labonne
Author Profile Icon Maxime Labonne
Maxime Labonne
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Table of Contents (25) Chapters Close

Preface 1. Part 1: Introduction to Graph Learning
2. Chapter 1: Getting Started with Graph Learning FREE CHAPTER 3. Chapter 2: Graph Theory for Graph Neural Networks 4. Chapter 3: Creating Node Representations with DeepWalk 5. Part 2: Fundamentals
6. Chapter 4: Improving Embeddings with Biased Random Walks in Node2Vec 7. Chapter 5: Including Node Features with Vanilla Neural Networks 8. Chapter 6: Introducing Graph Convolutional Networks 9. Chapter 7: Graph Attention Networks 10. Part 3: Advanced Techniques
11. Chapter 8: Scaling Up Graph Neural Networks with GraphSAGE 12. Chapter 9: Defining Expressiveness for Graph Classification 13. Chapter 10: Predicting Links with Graph Neural Networks 14. Chapter 11: Generating Graphs Using Graph Neural Networks 15. Chapter 12: Learning from Heterogeneous Graphs 16. Chapter 13: Temporal Graph Neural Networks 17. Chapter 14: Explaining Graph Neural Networks 18. Part 4: Applications
19. Chapter 15: Forecasting Traffic Using A3T-GCN 20. Chapter 16: Detecting Anomalies Using Heterogeneous GNNs 21. Chapter 17: Building a Recommender System Using LightGCN 22. Chapter 18: Unlocking the Potential of Graph Neural Networks for Real-World Applications
23. Index 24. Other Books You May Enjoy

Classifying nodes with vanilla neural networks

Compared to Zachary’s Karate Club, these two datasets include a new type of information: node features. They provide additional information about the nodes in a graph, such as a user’s age, gender, or interests in a social network. In a vanilla neural network (also called multilayer perceptron), these embeddings are directly used in the model to perform downstream tasks such as node classification.

In this section, we will consider node features as a regular tabular dataset. We will train a simple neural network on this dataset to classify our nodes. Note that this architecture does not take into account the topology of the network. We will try to fix this issue in the next section and compare our results.

The tabular dataset of node features can be easily accessed through the data object we created. First, I would like to convert this object into a regular pandas DataFrame by merging data.x (containing the node features...

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