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Learning Bayesian Models with R

You're reading from   Learning Bayesian Models with R Become an expert in Bayesian Machine Learning methods using R and apply them to solve real-world big data problems

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Product type Paperback
Published in Oct 2015
Publisher Packt
ISBN-13 9781783987603
Length 168 pages
Edition 1st Edition
Languages
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Author (1):
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Hari Manassery Koduvely Hari Manassery Koduvely
Author Profile Icon Hari Manassery Koduvely
Hari Manassery Koduvely
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Table of Contents (11) Chapters Close

Preface 1. Introducing the Probability Theory FREE CHAPTER 2. The R Environment 3. Introducing Bayesian Inference 4. Machine Learning Using Bayesian Inference 5. Bayesian Regression Models 6. Bayesian Classification Models 7. Bayesian Models for Unsupervised Learning 8. Bayesian Neural Networks 9. Bayesian Modeling at Big Data Scale Index

The brnn R package


The brnn package was developed by Paulino Perez Rodriguez and Daniel Gianola, and it implements the two-layer Bayesian regularized neural network described in the previous section. The main function in the package is brnn( ) that can be called using the following command:

>brnn(x,y,neurons,normalize,epochs,…,Monte_Carlo,…)

Here, x is an n x p matrix where n is the number of data points and p is the number of variables; y is an n dimensional vector containing target values. The number of neurons in the hidden layer of the network can be specified by the variable neurons. If the indicator function normalize is TRUE, it will normalize the input and output, which is the default option. The maximum number of iterations during model training is specified using epochs. If the indicator binary variable Monte_Carlo is true, then an MCMC method is used to estimate the trace of the inverse of the Hessian matrix A.

Let us try an example with the Auto MPG dataset that we used in Chapter...

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