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Python Data Analysis, Second Edition

You're reading from   Python Data Analysis, Second Edition Data manipulation and complex data analysis with Python

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Product type Paperback
Published in Mar 2017
Publisher Packt
ISBN-13 9781787127487
Length 330 pages
Edition 2nd Edition
Languages
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Author (1):
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Ivan Idris Ivan Idris
Author Profile Icon Ivan Idris
Ivan Idris
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Toc

Table of Contents (16) Chapters Close

Preface 1. Getting Started with Python Libraries FREE CHAPTER 2. NumPy Arrays 3. The Pandas Primer 4. Statistics and Linear Algebra 5. Retrieving, Processing, and Storing Data 6. Data Visualization 7. Signal Processing and Time Series 8. Working with Databases 9. Analyzing Textual Data and Social Media 10. Predictive Analytics and Machine Learning 11. Environments Outside the Python Ecosystem and Cloud Computing 12. Performance Tuning, Profiling, and Concurrency A. Key Concepts
B. Useful Functions C. Online Resources

Reading and writing Pandas DataFrames to HDF5 stores


The HDFStore class is the pandas abstraction responsible for dealing with HDF5 data. Using random data, we will demonstrate this functionality.

Give the HDFStore constructor the path to a demo file and create a store:

filename = "pytable_df_demo.h5"  
store = pd.io.pytables.HDFStore(filename) 
print(store) 

The preceding code snippet will print the file path to the store and its contents, which is empty at the moment:

    <class 'pandas.io.pytables.HDFStore'>
    File path: pytable_df_demo.h5
    Empty

HDFStore has a dict-like interface, meaning that we can store values, such as, for instance, a pandas DataFrame with a corresponding lookup key. Store a DataFrame containing random data in HDFStore as follows:

store['df'] = df 
print(store) 

Now the store contains data as illustrated in the following output:

    <class 'pandas.io.pytables.HDFStore'>
    File path: pytable_df_demo.h5
...
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