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Applied Unsupervised Learning with Python

You're reading from   Applied Unsupervised Learning with Python Discover hidden patterns and relationships in unstructured data with Python

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Product type Paperback
Published in May 2019
Publisher
ISBN-13 9781789952292
Length 482 pages
Edition 1st Edition
Languages
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Authors (3):
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Benjamin Johnston Benjamin Johnston
Author Profile Icon Benjamin Johnston
Benjamin Johnston
Christopher Kruger Christopher Kruger
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Christopher Kruger
Aaron Jones Aaron Jones
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Aaron Jones
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Table of Contents (12) Chapters Close

Applied Unsupervised Learning with Python
Preface
1. Introduction to Clustering FREE CHAPTER 2. Hierarchical Clustering 3. Neighborhood Approaches and DBSCAN 4. Dimension Reduction and PCA 5. Autoencoders 6. t-Distributed Stochastic Neighbor Embedding (t-SNE) 7. Topic Modeling 8. Market Basket Analysis 9. Hotspot Analysis Appendix

Interpreting t-SNE Plots


Now that we are able to use t-distributed SNE to visualize high-dimensional data, it is important to understand the limitations of such plots and what aspects are important in interpreting and generating them. In this section of the chapter, we will highlight some of the important features of t-SNE and demonstrate how care should be taken when using the visualization technique.

Perplexity

As described in the introduction to t-SNE, the perplexity values specify the number of nearest neighbors to be used in computing the conditional probability. The selection of this value can make a significant difference to the end result; with a low value of perplexity, local variations in the data dominate because a small number of samples are used in the calculation. Conversely, a large value of perplexity considers more global variations as many more samples are used in the calculation. Typically, it is worth trying a range of different values to investigate the effect of perplexity...

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