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Mastering Scientific Computing with R

You're reading from   Mastering Scientific Computing with R Employ professional quantitative methods to answer scientific questions with a powerful open source data analysis environment

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Product type Paperback
Published in Jan 2015
Publisher
ISBN-13 9781783555253
Length 432 pages
Edition 1st Edition
Languages
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Toc

Table of Contents (12) Chapters Close

Preface 1. Programming with R 2. Statistical Methods with R FREE CHAPTER 3. Linear Models 4. Nonlinear Methods 5. Linear Algebra 6. Principal Component Analysis and the Common Factor Model 7. Structural Equation Modeling and Confirmatory Factor Analysis 8. Simulations 9. Optimization 10. Advanced Data Management Index

An overview of statistical modeling

In order to explore the relationship between data and a set of experimental conditions, we often rely on statistical modeling. One of the central purposes of R is to estimate the fit of your data to a variety of models that you can easily optimize using several built-in functions and arguments. Although picking the best model to represent your data can be overwhelming, it is important to remember the principle of parsimony when choosing a model. Essentially, you should only include an explanatory variable in a model if it significantly improves the fit of a model. Therefore, our ideal model will try and fulfill most of the criteria in this list:

  • Contain n-1 parameters instead of n parameters
  • Contain k-1 explanatory variables instead of k variables
  • Be linear instead of curved
  • Not contain interactions between factors

In other words, we can simplify our model by removing non-significant interaction terms and explanatory variables, and by grouping together factor...

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