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Deep Learning for Genomics

You're reading from   Deep Learning for Genomics Data-driven approaches for genomics applications in life sciences and biotechnology

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Product type Paperback
Published in Nov 2022
Publisher Packt
ISBN-13 9781804615447
Length 270 pages
Edition 1st Edition
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Author (1):
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Upendra Kumar Devisetty Upendra Kumar Devisetty
Author Profile Icon Upendra Kumar Devisetty
Upendra Kumar Devisetty
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Table of Contents (18) Chapters Close

Preface 1. Part 1 – Machine Learning in Genomics
2. Chapter 1: Introducing Machine Learning for Genomics FREE CHAPTER 3. Chapter 2: Genomics Data Analysis 4. Chapter 3: Machine Learning Methods for Genomic Applications 5. Part 2 – Deep Learning for Genomic Applications
6. Chapter 4: Deep Learning for Genomics 7. Chapter 5: Introducing Convolutional Neural Networks for Genomics 8. Chapter 6: Recurrent Neural Networks in Genomics 9. Chapter 7: Unsupervised Deep Learning with Autoencoders 10. Chapter 8: GANs for Improving Models in Genomics 11. Part 3 – Operationalizing models
12. Chapter 9: Building and Tuning Deep Learning Models 13. Chapter 10: Model Interpretability in Genomics 14. Chapter 11: Model Deployment and Monitoring 15. Chapter 12: Challenges, Pitfalls, and Best Practices for Deep Learning in Genomics 16. Index 17. Other Books You May Enjoy

Summary

Model interpretability is a relatively new area, with most publications happening in the last few years, but it is a very active area of research in DL now that is of utmost importance to realize the promise of precision medicine. The ability to interpret model decisions or predictions has several business advantages and can ultimately lead to higher profits. Because of model interpretability, more and more companies are leaning toward using DL models in their decision-making processes. This is not restricted to low-risk sectors but also high-risk sectors such as medicine and genomics too. If they are not currently using model interpretability, they plan to incorporate it into their future strategy.

This chapter is an attempt to introduce you to model interpretability, why it is important, why business organizations care about it, and different methods for performing model interpretability, specifically for black-box models such as DNNs in the genomics field. The chapter...

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